GrippeCanadaV3, Main, Exploration, bibRecord, 000330

Respiratory tract versus cloacal sampling of migratory ducks for influenza A viruses: are both ends relevant?

Identifieur interne : 000330 ( Main/Exploration ); précédent : 000329; suivant : 000331

Respiratory tract versus cloacal sampling of migratory ducks for influenza A viruses: are both ends relevant?

Auteurs : Scott Krauss [États-Unis] ; Sydney Paul Pryor ; Garnet Raven ; Angela Danner ; Ghazi Kayali ; Richard J. Webby ; Robert G. Webster

Source :

Influenza and other respiratory viruses [ 1750-2659 ] ; 2013.

RBID : pubmed:22458473

Descripteurs français

KwdFr :
- Alberta, Animaux, Animaux sauvages (virologie), Appareil respiratoire (virologie), Canada, Canards (virologie), Cloaque (virologie), Grippe chez les oiseaux (virologie), Grippe chez les oiseaux (épidémiologie), Migration animale, Partie orale du pharynx (virologie), Prélèvement biologique (), Prévalence, Surveillance sentinelle (médecine vétérinaire), Virus de la grippe A (), Virus de la grippe A (isolement et purification).
MESH :
- isolement et purification : Virus de la grippe A.
- médecine vétérinaire : Surveillance sentinelle.
- virologie : Animaux sauvages, Appareil respiratoire, Canards, Cloaque, Grippe chez les oiseaux, Partie orale du pharynx.
- épidémiologie : Grippe chez les oiseaux.
- Alberta, Animaux, Canada, Migration animale, Prélèvement biologique, Prévalence, Virus de la grippe A.
Wicri :
- geographic : Canada.

English descriptors

KwdEn :
- Alberta, Animal Migration, Animals, Animals, Wild (virology), Canada, Cloaca (virology), Ducks (virology), Influenza A virus (classification), Influenza A virus (isolation & purification), Influenza in Birds (epidemiology), Influenza in Birds (virology), Oropharynx (virology), Prevalence, Respiratory System (virology), Sentinel Surveillance (veterinary), Specimen Handling (methods).
MESH :
- geographic : Alberta, Canada.
- classification : Influenza A virus.
- epidemiology : Influenza in Birds.
- isolation & purification : Influenza A virus.
- methods : Specimen Handling.
- veterinary : Sentinel Surveillance.
- virology : Animals, Wild, Cloaca, Ducks, Influenza in Birds, Oropharynx, Respiratory System.
- Animal Migration, Animals, Prevalence.

Abstract

BACKGROUND

Early studies in dabbling ducks showed that cloacal swabs yielded a larger number of avian influenza virus (AIV) isolates than did respiratory tract swabs. Historically, AIV surveillance has been performed by collecting cloacal or environmental fecal samples only. Highly pathogenic avian influenza H5N1 virus emerged in 1996 and replicated to higher titers in the respiratory rather than the gastrointestinal tract of ducks, prompting the collection of respiratory samples in addition to cloacal swabs from wild birds. Studies confirmed that some virus subtypes, especially H9 and highly pathogenic H5, are shed primarily through the respiratory tract and may not be detected in cloacal swabs.

OBJECTIVES

To examine prevalence and subtype differences for AIV isolates from cloacal or respiratory swabs of wild ducks and to determine whether individual respiratory tract samples should be included in AIV surveillance studies in wild birds.

METHODS

Individual respiratory tract and cloacal swabs were collected from each of 1036 wild ducks in Alberta, Canada, during the month of August from 2007 to 2010 in an ongoing surveillance study. Virus isolation in eggs and subtype identification by antigenic and molecular methods were performed.

RESULTS AND CONCLUSIONS

Respiratory tract and cloacal swabs yielded ten influenza virus HA subtypes representing 28 HA-NA combinations. Three HA-NA subtype combinations were found exclusively in respiratory tract samples. Only four HA subtypes (H1, H3, H4, and H7) were recovered from respiratory samples, but respiratory shedding was associated with the dominance of 1 year's subtype. Might respiratory shedding provide a risk assessment indicator?

DOI: 10.1111/j.1750-2659.2012.00359.x
PubMed: 22458473

Affiliations:

Links toward previous steps (curation, corpus...)

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Le document en format XML

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<term>Cloaca (virology)</term>
<term>Ducks (virology)</term>
<term>Influenza A virus (classification)</term>
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<front><div type="abstract" xml:lang="en"><p><b>BACKGROUND</b>
</p>
<p>Early studies in dabbling ducks showed that cloacal swabs yielded a larger number of avian influenza virus (AIV) isolates than did respiratory tract swabs. Historically, AIV surveillance has been performed by collecting cloacal or environmental fecal samples only. Highly pathogenic avian influenza H5N1 virus emerged in 1996 and replicated to higher titers in the respiratory rather than the gastrointestinal tract of ducks, prompting the collection of respiratory samples in addition to cloacal swabs from wild birds. Studies confirmed that some virus subtypes, especially H9 and highly pathogenic H5, are shed primarily through the respiratory tract and may not be detected in cloacal swabs.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>OBJECTIVES</b>
</p>
<p>To examine prevalence and subtype differences for AIV isolates from cloacal or respiratory swabs of wild ducks and to determine whether individual respiratory tract samples should be included in AIV surveillance studies in wild birds.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>METHODS</b>
</p>
<p>Individual respiratory tract and cloacal swabs were collected from each of 1036 wild ducks in Alberta, Canada, during the month of August from 2007 to 2010 in an ongoing surveillance study. Virus isolation in eggs and subtype identification by antigenic and molecular methods were performed.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>RESULTS AND CONCLUSIONS</b>
</p>
<p>Respiratory tract and cloacal swabs yielded ten influenza virus HA subtypes representing 28 HA-NA combinations. Three HA-NA subtype combinations were found exclusively in respiratory tract samples. Only four HA subtypes (H1, H3, H4, and H7) were recovered from respiratory samples, but respiratory shedding was associated with the dominance of 1 year's subtype. Might respiratory shedding provide a risk assessment indicator?</p>
</div>
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<country name="États-Unis"><region name="Tennessee"><name sortKey="Krauss, Scott" sort="Krauss, Scott" uniqKey="Krauss S" first="Scott" last="Krauss">Scott Krauss</name>
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   |texte=   Respiratory tract versus cloacal sampling of migratory ducks for influenza A viruses: are both ends relevant?
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Respiratory tract versus cloacal sampling of migratory ducks for influenza A viruses: are both ends relevant?

Respiratory tract versus cloacal sampling of migratory ducks for influenza A viruses: are both ends relevant?

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